euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

78 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip2019 chr1 81855784 81855784 + L1-Ta germline . no 611 .
srip8802 chr10 39098462 39098462 + L1-Ta germline . no 611 .
srip10543 chr10 91717633 91717633 - L1-Ta germline validated no 611 .
srip13204 chr11 29463700 29463700 + L1-Ta germline . no 611 .
srip14262 chr11 41831810 41831810 - L1-Ta germline . no 611 .
srip15363 chr11 58171839 58171839 + L1-Ta germline . no 611 .
srip18051 chr11 110377885 110377885 - L1-Ta germline . no 611 .
srip18142 chr11 112084565 112084565 + L1-Ta germline . no 611 BCO2
srip19289 chr11 134305648 134305648 - L1-Ta germline validated no 611 .
srip19913 chr12 11219230 11219230 - L1-Ta germline . no 611 PRH1-PRR4
srip20877 chr12 31353756 31353756 - L1-Ta germline . no 611 OVOS2
srip21001 chr12 33325795 33325795 - L1-Ta germline . no 611 .
srip23024 chr12 63569062 63569062 + L1-Ta germline . no 611 .
srip25536 chr12 117814443 117814443 - L1-Ta germline validated no 611 .
srip26496 chr12 126803020 126803020 - L1-Ta germline . no 611 .
srip26764 chr13 22489757 22489757 + L1-Ta germline . no 611 .
srip27129 chr13 27487992 27487992 + L1-Ta germline . no 611 .
srip28183 chr13 48856543 48856543 + L1-Ta germline . no 611 .
srip28923 chr13 61462329 61462329 - L1-Ta germline . no 611 .
srip31162 chr13 79259801 79259801 - L1-Ta germline . no 611 .
srip37348 chr14 59220402 59220402 + L1-Ta germline . no 611 .
srip39757 chr15 37707896 37707896 - L1-Ta germline . no 611 .
srip40121 chr15 47507326 47507326 - L1-Ta germline . no 611 SEMA6D
srip44088 chr16 17755307 17755307 - L1-Ta germline . no 611 .
srip46352 chr16 71028058 71028058 + L1-Ta germline validated no 611 HYDIN
srip46409 chr16 76865792 76865792 - L1-Ta germline . no 611 .
srip48445 chr17 68357410 68357410 + L1-Ta germline . no 611 .
srip50197 chr18 50097750 50097750 - L1-Ta germline . no 611 DCC
srip50930 chr18 59466376 59466376 + L1-Ta germline . no 611 .
srip53934 chr2 35879355 35879355 + L1-Ta germline . no 611 .
srip54940 chr2 53460057 53460057 + L1-Ta germline . no 611 .
srip56253 chr2 82098046 82098046 + L1-Ta germline . no 611 .
srip58225 chr2 141852913 141852913 - L1-Ta germline . no 611 LRP1B
srip63181 chr20 9477922 9477922 - L1-Ta germline . no 611 .
srip64755 chr20 41952104 41952104 - L1-Ta germline . no 611 .
srip65871 chr21 19517306 19517306 - L1-Ta germline . no 611 .
srip66174 chr21 23626190 23626190 - L1-Ta germline . no 611 .
srip71430 chr3 35803162 35803162 - L1-Ta germline . no 611 ARPP21
srip72726 chr3 55788580 55788580 + L1-Ta germline validated no 611 ERC2
srip73432 chr3 59852905 59852905 + L1-Ta germline validated no 611 FHIT
srip75596 chr3 85576568 85576568 + L1-Ta germline . no 611 CADM2
srip78575 chr3 151148542 151148542 - L1-Ta germline validated no 611 MED12L
srip79331 chr3 162717309 162717309 + L1-Ta germline . no 611 .
srip81664 chr3 187835313 187835313 - L1-Ta germline . no 611 .
srip82140 chr3 193354185 193354185 - L1-Ta germline validated no 611 OPA1
srip82585 chr4 14849037 14849037 + L1-Ta germline . no 611 .
srip84725 chr4 47007790 47007790 - L1-Ta germline . no 611 .
srip85391 chr4 57497067 57497067 - L1-Ta germline . no 611 .
srip92248 chr4 134596425 134596425 + L1-Ta germline . no 611 .
srip92638 chr4 138177325 138177325 + L1-Ta germline . no 611 .
srip92951 chr4 147225285 147225285 + L1-Ta germline validated no 611 SLC10A7
srip93845 chr4 158907270 158907270 - L1-Ta germline . no 611 .
srip95391 chr4 190659703 190659703 + L1-Ta germline . no 611 .
srip98023 chr5 33797541 33797541 - L1-Ta germline . no 611 ADAMTS12
srip100795 chr5 89450784 89450784 + L1-Ta germline validated no 611 .
srip105586 chr5 159351203 159351203 - L1-Ta germline . no 611 ADRA1B
srip109541 chr6 63368207 63368207 + L1-Ta germline . no 611 .
srip111096 chr6 77980671 77980671 - L1-Ta germline . no 611 .
srip111295 chr6 81293576 81293576 - L1-Ta germline . no 611 .
srip112787 chr6 102846084 102846084 - L1-Ta germline . no 611 .
srip115051 chr6 157968734 157968734 - L1-Ta germline . no 611 ZDHHC14
srip115676 chr6 162181262 162181262 + L1-Ta germline . no 611 PARK2
srip116375 chr7 17094715 17094715 + L1-Ta germline . no 611 .
srip119963 chr7 84901732 84901732 - L1-Ta germline . no 611 .
srip124090 chr8 4452925 4452925 - L1-Ta germline . no 611 CSMD1
srip124570 chr8 5829286 5829286 - L1-Ta germline . no 611 .
srip127211 chr8 72399219 72399219 - L1-Ta germline . no 611 .
srip128215 chr8 87315035 87315035 + L1-Ta germline . no 611 .
srip129981 chr8 131041209 131041209 + L1-Ta germline . no 611 .
srip130204 chr8 132724474 132724474 + L1-Ta germline . no 611 .
srip130380 chr8 137019478 137019478 + L1-Ta germline . no 611 .
srip131532 chr9 9236598 9236598 + L1-Ta germline . no 611 PTPRD
srip133383 chr9 32463888 32463888 - L1-Ta germline validated no 611 DDX58
srip136789 chrX 29269149 29269149 - L1-Ta germline . no 611 IL1RAPL1
srip140294 chrX 111229558 111229558 - L1-Ta germline . no 611 TRPC5
srip140766 chrX 119892834 119892834 - L1-Ta germline . no 611 .
srip141355 chrX 129525268 129525268 - L1-Ta germline . no 611 .
srip142163 chrX 154790187 154790187 + L1-Ta germline . no 611 TMLHE